CSPACE-7094: Adding script for migrating v4.4 herbarium profile based databases to...

diff --git a/misc/migrate_v4.4bonsai_to_v4.5.sql b/misc/migrate_v4.4bonsai_to_v4.5.sql
new file mode 100644 (file)
index 0000000..1720246
--- /dev/null
+++ b/misc/migrate_v4.4bonsai_to_v4.5.sql
@@ -0,0 +1,12 @@
+ALTER TABLE collectionobjects_accessionattributes ALTER COLUMN flowersjan TYPE CHARACTER VARYING USING CAST(flowersjan AS CHARACTER);
+ALTER TABLE collectionobjects_accessionattributes ALTER COLUMN flowersfeb TYPE CHARACTER VARYING USING CAST(flowersfeb AS CHARACTER);
+ALTER TABLE collectionobjects_accessionattributes ALTER COLUMN flowersmar TYPE CHARACTER VARYING USING CAST(flowersmar AS CHARACTER);
+ALTER TABLE collectionobjects_accessionattributes ALTER COLUMN flowersapr TYPE CHARACTER VARYING USING CAST(flowersapr AS CHARACTER);
+ALTER TABLE collectionobjects_accessionattributes ALTER COLUMN flowersmay TYPE CHARACTER VARYING USING CAST(flowersmay AS CHARACTER);
+ALTER TABLE collectionobjects_accessionattributes ALTER COLUMN flowersjun TYPE CHARACTER VARYING USING CAST(flowersjun AS CHARACTER);
+ALTER TABLE collectionobjects_accessionattributes ALTER COLUMN flowersjul TYPE CHARACTER VARYING USING CAST(flowersjul AS CHARACTER);
+ALTER TABLE collectionobjects_accessionattributes ALTER COLUMN flowersaug TYPE CHARACTER VARYING USING CAST(flowersaug AS CHARACTER);
+ALTER TABLE collectionobjects_accessionattributes ALTER COLUMN flowerssep TYPE CHARACTER VARYING USING CAST(flowerssep AS CHARACTER);
+ALTER TABLE collectionobjects_accessionattributes ALTER COLUMN flowersoct TYPE CHARACTER VARYING USING CAST(flowersoct AS CHARACTER);
+ALTER TABLE collectionobjects_accessionattributes ALTER COLUMN flowersnov TYPE CHARACTER VARYING USING CAST(flowersnov AS CHARACTER);
+ALTER TABLE collectionobjects_accessionattributes ALTER COLUMN flowersdec TYPE CHARACTER VARYING USING CAST(flowersdec AS CHARACTER);
\ No newline at end of file

diff --git a/misc/migrate_v4.4herbarium_to_v4.5.sql b/misc/migrate_v4.4herbarium_to_v4.5.sql
index ba8d1cd7f3fcdb29cc2a5d4f56263eaf3cfe8587..51af7780b1f5f7ae35aec1980009d029b6c14e96 100644 (file)
--- a/misc/migrate_v4.4herbarium_to_v4.5.sql
+++ b/misc/migrate_v4.4herbarium_to_v4.5.sql
@@ -4,15 +4,26 @@
 DROP TABLE IF EXISTS collectionobjects_naturalhistory;
 
 -- Rename these tables and corresponding columns
+
+ALTER TABLE associatedtaxagroup DROP CONSTRAINT IF EXISTS associatedtaxagroup_pk CASCADE;
+ALTER TABLE associatedtaxagroup DROP CONSTRAINT IF EXISTS associatedtaxagroup_id_hierarchy_fk CASCADE;
 ALTER TABLE associatedtaxagroup RENAME TO herbassociatedtaxagroup;
 ALTER TABLE herbassociatedtaxagroup RENAME COLUMN assocTaxon TO herbAssocTaxon;
 ALTER TABLE herbassociatedtaxagroup RENAME COLUMN assocTaxonCommonName TO herbAssocTaxonCommonName;
 ALTER TABLE herbassociatedtaxagroup RENAME COLUMN assocTaxonInteraction TO herbAssocTaxonInteraction;
+ALTER TABLE herbassociatedtaxagroup ADD CONSTRAINT herbassociatedtaxagroup_pk PRIMARY KEY (id);
+ALTER TABLE herbassociatedtaxagroup ADD CONSTRAINT herbassociatedtaxagroup_id_hierarchy_fk FOREIGN KEY (id) REFERENCES hierarchy (id) MATCH SIMPLE ON UPDATE NO ACTION ON DELETE CASCADE;
 
+ALTER TABLE localitygroup DROP CONSTRAINT IF EXISTS localitygroup_pk CASCADE;
+ALTER TABLE localitygroup DROP CONSTRAINT IF EXISTS localitygroup_id_hierarchy_fk CASCADE;
 ALTER TABLE localitygroup RENAME TO herblocalitygroup;
 ALTER TABLE herblocalitygroup RENAME COLUMN collectionLocationVerbatim TO herbCollectionLocationVerbatim;
 ALTER TABLE herblocalitygroup RENAME COLUMN collectionPlace TO herbCollectionPlace;
+ALTER TABLE herblocalitygroup ADD CONSTRAINT herblocalitygroup_pk PRIMARY KEY (id);
+ALTER TABLE herblocalitygroup ADD CONSTRAINT herblocalitygroup_id_hierarchy_fk FOREIGN KEY (id) REFERENCES hierarchy (id) MATCH SIMPLE ON UPDATE NO ACTION ON DELETE CASCADE;
 
+ALTER TABLE typespecimengroup DROP CONSTRAINT IF EXISTS typespecimengroup_pk CASCADE;
+ALTER TABLE typespecimengroup DROP CONSTRAINT IF EXISTS typespecimengroup_id_hierarchy_fk CASCADE;
 ALTER TABLE typespecimengroup RENAME TO herbtypespecimengroup;
 ALTER TABLE herbtypespecimengroup RENAME COLUMN typeSpecimenKind TO herbTypeSpecimenKind;
 ALTER TABLE herbtypespecimengroup RENAME COLUMN typeSpecimenAssertionBy TO herbTypeSpecimenAssertionBy;
@@ -20,7 +31,26 @@ ALTER TABLE herbtypespecimengroup RENAME COLUMN typeSpecimenReference TO herbTyp
 ALTER TABLE herbtypespecimengroup RENAME COLUMN typeSpecimenRefPage TO herbTypeSpecimenRefPage;
 ALTER TABLE herbtypespecimengroup RENAME COLUMN typeSpecimenBasionym TO herbTypeSpecimenBasionym;
 ALTER TABLE herbtypespecimengroup RENAME COLUMN typeSpecimenNotes TO herbTypeSpecimenNotes;
+ALTER TABLE herbtypespecimengroup ADD CONSTRAINT herbtypespecimengroup_pk PRIMARY KEY (id);
+ALTER TABLE herbtypespecimengroup ADD CONSTRAINT herbtypespecimengroup_id_hierarchy_fk FOREIGN KEY (id) REFERENCES hierarchy (id) MATCH SIMPLE ON UPDATE NO ACTION ON DELETE CASCADE;
 
+ALTER TABLE hybridparentgroup DROP CONSTRAINT IF EXISTS hybridparentgroup_pk CASCADE;
+ALTER TABLE hybridparentgroup DROP CONSTRAINT IF EXISTS hybridparentgroup_id_hierarchy_fk CASCADE;
 ALTER TABLE hybridparentgroup RENAME to herbHybridParentGroup;
 ALTER TABLE herbHybridParentGroup RENAME COLUMN hybridParent TO herbHybridParent;
 ALTER TABLE herbHybridParentGroup RENAME COLUMN hybridParentQualifier TO herbHybridParentQualifier;
+ALTER TABLE herbHybridParentGroup ADD CONSTRAINT herbHybridParentGroup_pk PRIMARY KEY (id);
+ALTER TABLE herbHybridParentGroup ADD CONSTRAINT herbHybridParentGroup_id_hierarchy_fk FOREIGN KEY (id) REFERENCES hierarchy (id) MATCH SIMPLE ON UPDATE NO ACTION ON DELETE CASCADE;
+
+ALTER TABLE collectionobjects_accessionattributes ALTER COLUMN flowersjan TYPE CHARACTER VARYING USING CAST(flowersjan AS CHARACTER);
+ALTER TABLE collectionobjects_accessionattributes ALTER COLUMN flowersfeb TYPE CHARACTER VARYING USING CAST(flowersfeb AS CHARACTER);
+ALTER TABLE collectionobjects_accessionattributes ALTER COLUMN flowersmar TYPE CHARACTER VARYING USING CAST(flowersmar AS CHARACTER);
+ALTER TABLE collectionobjects_accessionattributes ALTER COLUMN flowersapr TYPE CHARACTER VARYING USING CAST(flowersapr AS CHARACTER);
+ALTER TABLE collectionobjects_accessionattributes ALTER COLUMN flowersmay TYPE CHARACTER VARYING USING CAST(flowersmay AS CHARACTER);
+ALTER TABLE collectionobjects_accessionattributes ALTER COLUMN flowersjun TYPE CHARACTER VARYING USING CAST(flowersjun AS CHARACTER);
+ALTER TABLE collectionobjects_accessionattributes ALTER COLUMN flowersjul TYPE CHARACTER VARYING USING CAST(flowersjul AS CHARACTER);
+ALTER TABLE collectionobjects_accessionattributes ALTER COLUMN flowersaug TYPE CHARACTER VARYING USING CAST(flowersaug AS CHARACTER);
+ALTER TABLE collectionobjects_accessionattributes ALTER COLUMN flowerssep TYPE CHARACTER VARYING USING CAST(flowerssep AS CHARACTER);
+ALTER TABLE collectionobjects_accessionattributes ALTER COLUMN flowersoct TYPE CHARACTER VARYING USING CAST(flowersoct AS CHARACTER);
+ALTER TABLE collectionobjects_accessionattributes ALTER COLUMN flowersnov TYPE CHARACTER VARYING USING CAST(flowersnov AS CHARACTER);
+ALTER TABLE collectionobjects_accessionattributes ALTER COLUMN flowersdec TYPE CHARACTER VARYING USING CAST(flowersdec AS CHARACTER);
\ No newline at end of file